STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0982Probable transmembrane protein. (429 aa)    
Predicted Functional Partners:
RSp0279
Putative periplasmic component of the tol transport system tolb-related signal peptide protein.
  
     0.767
RSp0803
Putative hemagglutinin-related signal peptide protein.
  
     0.763
folB1
Probable dihydroneopterin aldolase protein.
 
    0.761
folB2
Putative dihydroneopterin aldolase protein.
 
    0.755
RSp0631
Putative sel1-like repeat; harboring protein.
  
     0.738
hmsH
Putative hemin-binding outer membrane transmembrane protein.
  
     0.731
RSp0630
Putative phospholipase protein.
  
     0.586
agaZ
Putative tagatose 6-phosphate kinase protein.
  
     0.581
RSp0712
Hypothetical protein of unknown function duf1326.
  
     0.543
RSc3390
Probable porin signal peptide protein.
  
     0.514
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.