STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1001Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (170 aa)    
Predicted Functional Partners:
RSc0566
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.769
RSc1116
Hypothetical signal peptide protein.
  
     0.725
RSc2555
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.724
RSc0155
Hypothetical protein of unknown function duf185.
  
     0.713
RSc1325
Hypothetical protein of unknown function duf598.
  
     0.673
RSc0454
Putative fe-s oxidoreductase fad/fmn-containing dehyfrogenase oxidoreductase protein.
  
     0.656
RSc1146
Probable transmembrane protein.
 
     0.644
RSc1557
Probable transmembrane protein.
  
     0.587
bioC
Putative biotin synthesis protein (methyltransferase); Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.
 
     0.568
RSc1514
Hypothetical generic methyltransferase; protein.
  
     0.568
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.