STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyrBProbable aromatic-amino-acid aminotransferase protein. (398 aa)    
Predicted Functional Partners:
pheA
Probable bifunctional protein: chorismate mutase and prephenate dehydratase.
    
 0.979
phhA
Probable phenylalanine-4-hydroxylase (pah) (phe-4-monooxygenase). oxidoreductase protein.
  
 
 0.979
tyrA
Putative prephenate dehydrogenase oxidoreductase protein.
    
 0.969
hpd
Probable 4-hydroxyphenylpyruvate dioxygenase oxidoreductase protein.
  
 
 0.962
RSp1400
Probable 4-hydroxyphenylpyruvate dioxygenase-related protein.
  
 
 0.948
RSp1316
Probable 4-hydroxyphenylpyruvate dioxygenase oxidoreductase protein.
  
 
 0.942
RSp0197
Putative chorismate mutase protein; Catalyzes the Claisen rearrangement of chorismate to prephenate.
    
 0.922
metK
S-adenosylmethionine synthetase (methionineadenosyltransferase) (adomet synthetase) (mat) protein; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
     
 0.911
metHa
Probable 5-methyltetrahydrofolate--homocysteine methyltransferase (methionine synthase, vitamin-b12 dependent isozyme) protein.
     
 0.910
metE
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
     
 0.910
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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