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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1043Putative rieske [2fe-2s] region harboring protein. (138 aa)    
Predicted Functional Partners:
RSp1220
Probable flavoprotein fad oxidoreductase.
  
 
 0.849
nirB
Probable nitrite reductase nadph (large subunit) oxidoreductase protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.849
rluC
Probable ribosomal large subunit pseudouridine synthase c protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.806
RSc1042
Putative phosphoglycolate phosphatase protein.
       0.806
RSc1044
Putative protease transmembrane protein.
       0.683
RSc2809
Putative transmembrane protein.
   
   0.585
narH
Probable respiratory nitrate reductase oxidoreductase protein.
  
  
 0.577
RSc2778
Putative tonb-related transmembrane protein.
  
     0.523
nirE
Putative uroporphyrinogen-III c-methyltransferase protein; Belongs to the precorrin methyltransferase family.
  
  
 0.515
narJ
Putative respiratory nitrate reductase oxidoreductase protein.
  
  
 0.503
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.