STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1074Probable signal peptide protein. (568 aa)    
Predicted Functional Partners:
RSc1075
Probable two-component system sensor histidine kinase transcription regulator protein.
 
     0.951
RSc1073
Probable two-component system response regulator transcription regulator protein.
 
     0.828
RSc1775
Probable hemagglutinin-related protein.
 
     0.564
RSc1076
Probable two-component system response regulator transcription regulator protein.
 
     0.518
RSc0724
Putative type-4 fimbrial biogenesis pily1-related signal peptide protein.
  
     0.464
RSc0795
Probable transmembrane protein.
  
     0.436
RSc3183
Probable hemagglutinin-related signal peptide protein.
 
     0.422
RSp1536
Probable hemagglutinin-related signal peptide protein.
 
     0.421
RSc0727
Putative type-4 fimbrial biogenesis pilv-related transmembrane protein.
  
     0.416
RSp0611
Probable transmembrane protein.
  
     0.414
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.