STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc1078Probable transcriptional regulatory dna-binding transcription regulator protein. (255 aa)    
Predicted Functional Partners:
RSc2114
Probable transcription regulator protein.
  
  
 0.677
gudD1
Probable glucarate dehydratase protein.
 
   
 0.666
RSp0233
Probable hydrolase transmembrane protein.
     0.624
exuT2
Putative hexuronate transporter transmembrane protein.
 
   
 0.612
RSp1506
Probable transcription regulator protein.
  
  
 0.573
RSc2117
Probable transcription regulator protein.
  
  
 0.568
RSc0302
Probable transcription regulator protein.
  
  
 0.552
lldP
Putative l-lactate permease transmembrane protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.552
RSc3411
Probable transcription regulator protein.
  
  
 0.526
RSc1997
Probable transcription regulator protein.
  
  
 0.491
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.