STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1083Putative galactose mutarotase-like protein. (323 aa)    
Predicted Functional Partners:
RSc2754
Probable ipr011013 galactose mutarotase-like protein.
  
  
 
0.923
glk
Probable glucokinase (glucose kinase) protein; Belongs to the bacterial glucokinase family.
    
 0.909
RSc1082
Probable outer membrane porin protein.
       0.618
RSc1081
Probable glucosidase protein; Belongs to the glycosyl hydrolase 31 family.
  
  
 0.564
RSp0832
Probable gluconolactonase protein.
 
  
 0.518
treA
Probable periplasmic alpha,alpha-trehalase signal peptide protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system.
     
  0.500
exuT2
Putative hexuronate transporter transmembrane protein.
       0.496
RSc2755
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
  
 0.477
RSc0584
Probable d-alanyl-d-alanine carboxypeptidase signal peptide protein.
  
    0.463
RSp0183
Probable 3-carboxymuconate cyclase protein.
  
    0.439
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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