STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagLProbable glutathione s-transferase protein. (213 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
 
 
 0.994
RSc0301
Fumarylacetoacetate (FAA) hydrolase; Putative 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) oxidoreductase protein.
 
 0.983
hmgB
Probable fumarylacetoacetase (fumarylacetoacetate hydrolase) protein.
 
 
 0.983
nagK
Putative isomerase-decarboxylase homolog protein.
  
  
 0.958
nagI
Probable gentisate 1,2-dioxygenase oxidoreductase protein.
 
   
 0.923
phhA
Probable phenylalanine-4-hydroxylase (pah) (phe-4-monooxygenase). oxidoreductase protein.
 
  
 0.827
RSp1316
Probable 4-hydroxyphenylpyruvate dioxygenase oxidoreductase protein.
 
  
 0.807
RSp1347
Probable 4-hydroxyphenylpyruvate dioxygenase oxidoreductase protein.
 
  
 0.807
hpd
Probable 4-hydroxyphenylpyruvate dioxygenase oxidoreductase protein.
 
  
 0.802
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.754
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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