STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagIProbable gentisate 1,2-dioxygenase oxidoreductase protein. (348 aa)    
Predicted Functional Partners:
gstB
Probable glutathione s-transferase protein.
 
  
 0.979
nagG
Putative salicylate-5-hydroxylase large oxygenase component oxidoreductase protein.
 
   
 0.925
nagL
Probable glutathione s-transferase protein.
 
   
 0.923
nagH
Putative salicylate-5-hydroxylase small oxygenase component oxidoreductase protein.
 
     0.916
nagK
Putative isomerase-decarboxylase homolog protein.
   
 0.914
RSc1825
Probable dioxygenase oxidoreductase protein.
  
  
 
0.909
nagAb
Probable ferredoxin subunit of a ring-hydroxylating dioxygenase oxidoreductase protein.
       0.768
nagAa
Probable ferredoxin oxidoreductase oxidoreductase protein.
 
   
 0.755
cmtC
Probable 2,3-dihydroxy-p-cumate-3,4-dioxygenase oxidoreductase protein.
  
   
 0.650
cmtD
Probable hcomoda decarboxylase protein.
  
     0.622
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.