STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagAbProbable ferredoxin subunit of a ring-hydroxylating dioxygenase oxidoreductase protein. (103 aa)    
Predicted Functional Partners:
nagG
Putative salicylate-5-hydroxylase large oxygenase component oxidoreductase protein.
  
 0.998
nagAa
Probable ferredoxin oxidoreductase oxidoreductase protein.
 
  
 0.993
nagH
Putative salicylate-5-hydroxylase small oxygenase component oxidoreductase protein.
 
 
 0.991
RSp1220
Probable flavoprotein fad oxidoreductase.
 
 0.946
nirB
Probable nitrite reductase nadph (large subunit) oxidoreductase protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 0.919
RSc0181
Probable pseudogene (alcohol dehydrogenase n-terminal fragment) protein.
     
  0.900
adhC2
Probable bifunctional: glutathione-dependent formaldehyde dehydrogenase and alcohol dehydrogenase class III oxidoreductase protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
  0.900
RSc1505
Putative alcohol dehydrogenase superfamily, zinc-containing oxidoreductase protein.
     
  0.900
adhA
Putative propanol-preferring alcohol dehydrogenase oxidoreductase protein.
     
  0.900
adhC1
Probable bifunctional: glutathione-dependent formaldehyde dehydrogenase and alcohol dehydrogenase class III oxidoreductase protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
  0.900
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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