STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagHPutative salicylate-5-hydroxylase small oxygenase component oxidoreductase protein. (157 aa)    
Predicted Functional Partners:
nagG
Putative salicylate-5-hydroxylase large oxygenase component oxidoreductase protein.
 
 0.999
nagAa
Probable ferredoxin oxidoreductase oxidoreductase protein.
 
 
 0.992
nagAb
Probable ferredoxin subunit of a ring-hydroxylating dioxygenase oxidoreductase protein.
 
 
 0.991
nagI
Probable gentisate 1,2-dioxygenase oxidoreductase protein.
 
     0.916
vanA
Probable vanillate o-demethylase oxygenase subunit oxidoreductase protein.
 
 
 0.896
RSc2224
Putative bacterial ring hydroxylating dioxygenase, alpha subunit; EC_number 1.14.1.-.
  
 
 0.854
RSp0062
Putative dioxygenase (alpha subunit) oxidoreductase protein.
  
 
 0.854
RSc1092
Probable transcriptional regulatory dna-binding transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
 
     0.759
RSc2434
Putative reductase oxidoreductase protein.
  
  
 0.686
cmtD
Probable hcomoda decarboxylase protein.
 
     0.619
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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