STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagAaProbable ferredoxin oxidoreductase oxidoreductase protein. (328 aa)    
Predicted Functional Partners:
nagH
Putative salicylate-5-hydroxylase small oxygenase component oxidoreductase protein.
 
 
 0.997
nagG
Putative salicylate-5-hydroxylase large oxygenase component oxidoreductase protein.
 
 
 0.995
nagAb
Probable ferredoxin subunit of a ring-hydroxylating dioxygenase oxidoreductase protein.
 
  
 0.994
RSp0682
Putative histamine dehydrogenase oxidoreductase protein.
  
 0.950
pyrD
Probable dihydroorotate dehydrogenase oxidoreductase protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
 0.949
gltD
Probable glutamate synthase (small subunit) oxidoreductase protein.
   
 0.929
adhC2
Probable bifunctional: glutathione-dependent formaldehyde dehydrogenase and alcohol dehydrogenase class III oxidoreductase protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
 0.911
adhC1
Probable bifunctional: glutathione-dependent formaldehyde dehydrogenase and alcohol dehydrogenase class III oxidoreductase protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
 0.911
RSc0181
Probable pseudogene (alcohol dehydrogenase n-terminal fragment) protein.
     
 0.908
RSc1505
Putative alcohol dehydrogenase superfamily, zinc-containing oxidoreductase protein.
    
  0.900
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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