STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1092Probable transcriptional regulatory dna-binding transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (300 aa)    
Predicted Functional Partners:
nagG
Putative salicylate-5-hydroxylase large oxygenase component oxidoreductase protein.
 
   
 0.815
nagAa
Probable ferredoxin oxidoreductase oxidoreductase protein.
 
   
 0.809
nagH
Putative salicylate-5-hydroxylase small oxygenase component oxidoreductase protein.
 
     0.759
RSc1084
Probable outer membrane p2; transmembrane protein.
     
 0.710
nagL
Probable glutathione s-transferase protein.
     
 0.663
pcaK
Putative 4-hydroxybenzoate transporter transmembrane protein.
      
 0.536
nagI
Probable gentisate 1,2-dioxygenase oxidoreductase protein.
 
     0.516
nagAb
Probable ferredoxin subunit of a ring-hydroxylating dioxygenase oxidoreductase protein.
 
     0.513
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.