STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1110Probable transcriptional regulatory dna-binding transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (306 aa)    
Predicted Functional Partners:
RSp1571
Probable transcriptional regulator transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.750
RSc1111
Hypothetical membrane transmembrane protein.
 
     0.746
RSc1094
Probable transcriptional regulatory dna-binding transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.742
nac
Probable nitrogen assimilation regulatory transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.731
RSp0823
Probable transcriptional regulator transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.711
RSp1237
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.711
RSp1593
Probable transcription regulator transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.666
RSc1880
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.633
RSc2761
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.633
RSp0308
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.622
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.