STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1125Putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily) protein. (273 aa)    
Predicted Functional Partners:
RSc1124
Putative proteasome-type protease protein.
       0.787
pyrG
Probable ctp synthase (utp--ammonia ligase) (ctp synthetase) protein; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.672
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.671
RSc2086
Putative transcription regulator protein.
  
     0.668
kdsA
Probable 2-dehydro-3-deoxyphosphooctonate aldolase (phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-d-manno-octulosonic acid 8-phosphate synthetase) (kdo-8-phosphate synthetase) (kdo 8-p synthase) (kdops) protein; Belongs to the KdsA family.
       0.582
RSc1128
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.526
RSc1123
Putative transglutaminase-like enzyme protein.
       0.496
RSc3299
Probable transmembrane protein.
 
     0.490
RSc1122
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.473
RSc1366
Probable acyl-coa-binding protein.
  
 
  0.470
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.