STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1135Putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily) protein. (307 aa)    
Predicted Functional Partners:
RSc0562
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.687
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.671
RSc1134
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.554
RSc3098
Putative gcn5-related n-acetyltransferase; protein.
  
    0.510
RSc1366
Probable acyl-coa-binding protein.
  
 
  0.490
RSc1806
Probable polyketide synthase protein.
  
 0.463
RSc3299
Probable transmembrane protein.
 
     0.460
RSc1598
Probable two-component transmembrane sensor histidine kinase transcription regulator protein.
  
     0.452
RSc0299
Putative prolin-rich signal peptide protein.
  
     0.447
RSc1810
Probable polyketide synthase protein.
  
 0.442
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.