STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1137Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (180 aa)    
Predicted Functional Partners:
RSc1138
Putative saccharopine dehydrogenase and relateds oxidoreductase protein.
     0.913
RSc1136
Putative thiol-disulphide oxidoreductase dcc protein.
 
     0.879
RSc1139
Probable thioredoxin reductase oxidoreductase protein.
       0.773
RSp1422
Putative peptide synthetase protein.
  
  
 0.613
RSp0641
Probable non ribosomal peptide synthetase protein.
  
  
 0.595
RSc1140
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.545
RSc1811
Putative siderophore synthetase protein.
  
  
 0.544
RSc1806
Probable polyketide synthase protein.
  
  
 0.540
RSc1804
Putative peptide synthase with thioesterase and phosphopantetheinyl transferase domains protein; Belongs to the P-Pant transferase superfamily.
  
  
 0.505
RSc1141
Putative rna-binding protein, yrdc; Belongs to the SUA5 family.
       0.498
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.