STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1139Probable thioredoxin reductase oxidoreductase protein. (379 aa)    
Predicted Functional Partners:
trxB
Probable thioredoxin reductase oxidoreductase protein.
  
  
0.919
trxA
Probable thioredoxin 1 (redox factor) protein; Belongs to the thioredoxin family.
  
 
 0.859
RSc0779
Putative thioredoxin protein.
  
 
 0.788
RSc1136
Putative thiol-disulphide oxidoreductase dcc protein.
       0.773
RSc1137
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.773
RSc1138
Putative saccharopine dehydrogenase and relateds oxidoreductase protein.
       0.773
ahpC2
Putative alkyl hydroperoxide reductase (subunit c) oxidoreductase protein; EC_number 1.6.4.-.
  
 
 0.641
ahpC1
Probable alkyl hydroperoxide reductase (subunit c) oxidoreductase protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.641
RSc0754
Probable antioxidant (peroxidase) oxidoreductase protein.
  
 
 0.640
RSc1140
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.545
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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