STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1139Probable thioredoxin reductase oxidoreductase protein. (379 aa)    
Predicted Functional Partners:
trxB
Probable thioredoxin reductase oxidoreductase protein.
  
  
0.908
trxA
Probable thioredoxin 1 (redox factor) protein; Belongs to the thioredoxin family.
  
 
 0.847
ahpC2
Putative alkyl hydroperoxide reductase (subunit c) oxidoreductase protein; EC_number 1.6.4.-.
  
 
 0.795
ahpC1
Probable alkyl hydroperoxide reductase (subunit c) oxidoreductase protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.795
RSc1136
Putative thiol-disulphide oxidoreductase dcc protein.
     
 0.784
RSc1137
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.773
RSc1138
Putative saccharopine dehydrogenase and relateds oxidoreductase protein.
       0.773
RSc0779
Putative thioredoxin protein.
  
 
 0.739
RSc0754
Probable antioxidant (peroxidase) oxidoreductase protein.
  
 
 0.711
katE
Probable catalase hydroperoxidase hpII oxidoreductase protein; Belongs to the catalase family.
   
 
 0.627
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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