STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc1157Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (241 aa)    
Predicted Functional Partners:
RSc3398
Probable flavohemoprotein (hemoglobin-like) transmembrane; Belongs to the globin family.
   
 0.930
RSp0063
Probable ferredoxin oxidoreductase protein.
    
 0.906
vanB
Probable vanillate o-demethylase (vanillate degradation ferredoxin-like) oxidoreductase protein.
    
 0.906
RSc1158
Putative glutamine amidotransferase, classI active site; protein.
  
    0.792
moaA
Probable molybdenum cofactor biosynthesis protein a; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
 
  
 0.550
RSc1159
Putative transcription regulator protein.
       0.547
moaC
Probable molybdenum cofactor biosynthesis protein c; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP).; Belongs to the MoaC family.
 
  
 0.502
paaE
Probable ferredoxin reductase protein.
    
 0.475
mog
Probable molybdochetalase in molybdopterin biosynthesis protein.
 
   
 0.435
nasA
Probable nitrate reductase large subunit oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
   
 0.425
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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