STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cysE2Probable o-acetylserine synthase (serine acetyltransferase) protein. (268 aa)    
Predicted Functional Partners:
cysM
Probable cysteine synthase b (csase b) protein; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.985
cysK1
Probable cysteine synthase a protein.
 
 0.977
cysS
Probable cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.954
cysE1
Probable serine acetyltransferase protein.
  
  
 
0.919
sda2b
Probable inactivated l-serine amonya-lyase, l-serine dehydratase 2 (l-serine deaminase 2) protein.
     
 0.906
sdaA2
Probable l-serine amonya-lyase, l-serine dehydratase 2 (l-serine deaminase) protein; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.906
sdaA1
Probable l-serine dehydratase (l-serine deaminase) protein; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.906
sbnA
Probable cysteine synthase protein; Catalyzes the synthesis of N-((2S)-2-amino-2-carboxyethyl)-L- glutamate (ACEGA) from O-phospho-L-serine and L-glutamate.
 
 
 0.867
RSc1327
Probable homoserine dehydrogenase oxidoreductase protein.
  
  
 0.858
serB
Putative phosphoserine phosphatase protein.
    
 0.828
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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