STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysE2Probable o-acetylserine synthase (serine acetyltransferase) protein. (268 aa)    
Predicted Functional Partners:
cysM
Probable cysteine synthase b (csase b) protein; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.985
cysK1
Probable cysteine synthase a protein.
 
 0.978
cysS
Probable cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.953
cysE1
Probable serine acetyltransferase protein.
  
  
 
0.919
sda2b
Probable inactivated l-serine amonya-lyase, l-serine dehydratase 2 (l-serine deaminase 2) protein.
     
 0.905
sdaA2
Probable l-serine amonya-lyase, l-serine dehydratase 2 (l-serine deaminase) protein; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.905
sdaA1
Probable l-serine dehydratase (l-serine deaminase) protein; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.905
sbnA
Probable cysteine synthase protein; Catalyzes the synthesis of N-((2S)-2-amino-2-carboxyethyl)-L- glutamate (ACEGA) from O-phospho-L-serine and L-glutamate.
 
 
 0.871
RSc1327
Probable homoserine dehydrogenase oxidoreductase protein.
  
  
 0.855
serB
Putative phosphoserine phosphatase protein.
    
 0.828
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.