STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc1173Probable substrate-binding periplasmic (pbp) abc transporter protein. (625 aa)    
Predicted Functional Partners:
RSc1174
Probable transmembrane abc transporter protein.
  
 0.977
RSc1175
Probable transmembrane abc transporter protein.
 
  
 0.964
RSc1176
Probable atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
  
 0.949
RSc1379
Probable atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
 
 0.835
dppB1
Probable transmembrane (dipeptide transport system permease) abc transporter protein.
 
 
 0.825
RSc1381
Probable transmembrane abc transporter protein.
  
 
 0.800
dppB2
Probable dipeptide transmembrane abc transporter protein.
  
 
 0.800
fabI
Probable enoyl-[acyl-carrier-protein] reductase [nadh] oxidoreductase.
  
    0.607
dppC1
Probable dipeptide transport system permease transmembrane protein.
 
  
 0.499
RSc2006
Probable extracellular solute-binding, family 5 abc transporter protein.
 
 
0.475
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.