STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1174Probable transmembrane abc transporter protein. (351 aa)    
Predicted Functional Partners:
RSc1175
Probable transmembrane abc transporter protein.
  
 0.981
RSc1173
Probable substrate-binding periplasmic (pbp) abc transporter protein.
  
 0.974
RSc1176
Probable atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
  
 0.968
dppC1
Probable dipeptide transport system permease transmembrane protein.
     0.776
dppC2
Probable dipeptide transmembrane abc transporter protein.
     0.758
RSc1382
Probable transmembrane abc transporter protein.
     0.756
RSc1379
Probable atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
     0.727
dppD1
Probable oligopeptide atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
   
 0.664
dppD2
Probable oligopeptide atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
   
 0.639
RSc2006
Probable extracellular solute-binding, family 5 abc transporter protein.
   
 0.570
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.