STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1180Putative multidrug efflux pump transmembrane protein. (448 aa)    
Predicted Functional Partners:
RSc1181
Probable cog1807, 4-amino-4-deoxy-l-arabinose transferase and related glycosyltransferases of pmt family transmembrane protein.
 
    0.863
RSc2310
Probable type II secretory pathway, pseudopilin pulg-related transmembrane protein.
      
 0.662
RSp0150
Probable general secretion pathway gspg-related transmembrane protein.
      
 0.662
RSp0468
Probable general secretion pathway gspg-related transmembrane protein.
      
 0.662
RSc2301
Probable cog2165, type II secretory pathway, pseudopilin pulg-related protein.
      
 0.640
RSc2302
Probable cog2165, type II secretory pathway, pseudopilin pulg-related signal peptide protein.
      
 0.640
RSp0141
Putative general secretion pathway gspg related transmembrane protein.
      
 0.640
RSp0142
Putative general secretion pathway gspg related transmembrane protein.
      
 0.640
RSp0470
Probable general secretion pathway gspg-related transmembrane protein.
      
 0.640
RSp0471
Putative general secretion pathway gspg-related transmembrane protein.
      
 0.640
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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