STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc1184Conserved hypothetical protein; Miscellaneous; hypothetical/global homology; Belongs to the MtfA family. (288 aa)    
Predicted Functional Partners:
RSc1183
Putative signal peptide protein.
       0.773
RSc1185
Probable transcription regulator protein.
       0.603
dedA
Probable deda transmembrane protein.
  
  
 0.544
RSc1116
Hypothetical signal peptide protein.
  
     0.469
rpmE
Probable 50s ribosomal protein l31 type b.
       0.453
rseB
Putative sigma-e factor regulatory (negative regulator) transcription regulator protein.
  
     0.425
glcE
Probable glycolate oxidase subunit oxidoreductase protein.
  
     0.417
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.