STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
addAProbable homologous recombinational repair protein, atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. (1177 aa)    
Predicted Functional Partners:
addB
Probable homologous recombinational repair protein.
 
   
 0.977
repA
Probable repa replicase protein.
  
     0.708
RSc2655
Probable transmembrane protein.
 
     0.697
RSc3360
Hypothetical transmembrane protein.
  
     0.668
RSc0176
Probable lipoprotein.
  
     0.652
trxA
Probable thioredoxin 1 (redox factor) protein; Belongs to the thioredoxin family.
       0.650
RSc2677
Putative type 4 fimbrial biogenesis pilw-related protein transmembrane.
  
     0.648
RSc2678
Probable type 4 fimbrial biogenesis pilv-related transmembrane protein.
 
     0.647
RSc2378
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.638
uvrD
Probable dna helicase II protein.
 
  
0.633
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.