STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpiAProbable ribose-5-phosphate isomerase a (phosphoriboisomerase a)(pri) protein; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (228 aa)    
Predicted Functional Partners:
rbsK
Putative ribokinase protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
   
 0.972
prsA
Probable ribose-phosphate pyrophosphokinase protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 
 0.969
rpe
Probable ribulose-phosphate 3-epimerase protein; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.963
tktA
Probable transketolase protein; Belongs to the transketolase family.
   
 0.954
RSc0202
Probable ribose-phosphate pyrophosphokinase protein; Belongs to the ribose-phosphate pyrophosphokinase family.
 
 
 0.933
gntK
Probable thermoresistant gluconokinase (gluconate kinase 2) protein.
    
 0.914
RSc0691
Putative phosphomannomutase or phosphoglucomutase protein.
    
 0.913
pgl
Probable 6-phosphogluconolactonase oxidoreductase protein; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
 
  
 0.813
tal
Probable transaldolase protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 
 0.792
zwf
Probable glucose-6-phosphate 1-dehydrogenase oxidoreductase protein; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
  
 0.775
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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