RSc1242 protein (Ralstonia solanacearum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

RSc1242

Probable sugar atp-binding abc transporter protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family. (518 aa)

Predicted Functional Partners:

mocB

0.995

RSc1243

0.995

araH

0.950

RSc1015

0.934

RSc1017

0.877

xylH

0.835

xylF

0.754

metG1

0.701

iolC

0.612

RSc2175

0.598

Your Current Organism:

Ralstonia solanacearum

NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RSc1015	RSc1017	RSc1015	RSc1017	Probable ribose abc transporter, permease abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.	Probable ribose abc transporter, periplasmic ribose-binding abc transporter protein.	0.994
RSc1015	RSc1242	RSc1015	RSc1242	Probable ribose abc transporter, permease abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.	Probable sugar atp-binding abc transporter protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family.	0.934
RSc1015	iolC	RSc1015	RSc1240	Probable ribose abc transporter, permease abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.	Probable transferase kinase protein.	0.475
RSc1015	mocB	RSc1015	RSc1241	Probable ribose abc transporter, permease abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.	Putative rhizopine-binding precursor signal peptide protein.	0.990
RSc1015	xylF	RSc1015	RSp1633	Probable ribose abc transporter, permease abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.	Probable d-xylose-binding periplasmic abc transporter protein.	0.798
RSc1017	RSc1015	RSc1017	RSc1015	Probable ribose abc transporter, periplasmic ribose-binding abc transporter protein.	Probable ribose abc transporter, permease abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.	0.994
RSc1017	RSc1242	RSc1017	RSc1242	Probable ribose abc transporter, periplasmic ribose-binding abc transporter protein.	Probable sugar atp-binding abc transporter protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family.	0.877
RSc1017	RSc1243	RSc1017	RSc1243	Probable ribose abc transporter, periplasmic ribose-binding abc transporter protein.	Probable sugar transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.	0.916
RSc1017	araH	RSc1017	RSc2756	Probable ribose abc transporter, periplasmic ribose-binding abc transporter protein.	Probable l-arabinose transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.	0.925
RSc1017	iolC	RSc1017	RSc1240	Probable ribose abc transporter, periplasmic ribose-binding abc transporter protein.	Probable transferase kinase protein.	0.445
RSc1017	xylF	RSc1017	RSp1633	Probable ribose abc transporter, periplasmic ribose-binding abc transporter protein.	Probable d-xylose-binding periplasmic abc transporter protein.	0.458
RSc1017	xylH	RSc1017	RSp1635	Probable ribose abc transporter, periplasmic ribose-binding abc transporter protein.	Probable xylose transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.	0.793
RSc1242	RSc1015	RSc1242	RSc1015	Probable sugar atp-binding abc transporter protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family.	Probable ribose abc transporter, permease abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.	0.934
RSc1242	RSc1017	RSc1242	RSc1017	Probable sugar atp-binding abc transporter protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family.	Probable ribose abc transporter, periplasmic ribose-binding abc transporter protein.	0.877
RSc1242	RSc1243	RSc1242	RSc1243	Probable sugar atp-binding abc transporter protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family.	Probable sugar transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.	0.995
RSc1242	RSc2175	RSc1242	RSc2175	Probable sugar atp-binding abc transporter protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family.	Probable transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.	0.598
RSc1242	araH	RSc1242	RSc2756	Probable sugar atp-binding abc transporter protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family.	Probable l-arabinose transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.	0.950
RSc1242	iolC	RSc1242	RSc1240	Probable sugar atp-binding abc transporter protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family.	Probable transferase kinase protein.	0.612
RSc1242	metG1	RSc1242	RSc2381	Probable sugar atp-binding abc transporter protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family.	Probable methionyl-trna synthetase (methionine--trna ligase)(metrs) protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.701
RSc1242	mocB	RSc1242	RSc1241	Probable sugar atp-binding abc transporter protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family.	Putative rhizopine-binding precursor signal peptide protein.	0.995

page 1 of 3

Server load: low (28%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About