STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1243Probable sugar transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family. (341 aa)    
Predicted Functional Partners:
mocB
Putative rhizopine-binding precursor signal peptide protein.
 0.998
RSc1242
Probable sugar atp-binding abc transporter protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family.
 0.995
araG
Probable l-arabinose atp-binding abc transporter protein; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
 
 0.933
RSc1016
Probable ribose abc transporter, atp-binding abc transporter protein.
 
 0.927
xylG
Probable d-xylose atp-binding abc transporter protein; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.927
RSc1017
Probable ribose abc transporter, periplasmic ribose-binding abc transporter protein.
 
 0.910
xylF
Probable d-xylose-binding periplasmic abc transporter protein.
 
   
 0.773
iolC
Probable transferase kinase protein.
  
 0.660
iolH
Putative protein implicated in myo-inositol catabolique pathway.
 
    0.659
iolI
Putative protein implicated in myo-inositol catabolique pathway.
 
     0.652
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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