STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1255Probable transmembrane protein. (285 aa)    
Predicted Functional Partners:
RSc1256
Putative molybdopterin binding domain-harboring protein.
     0.924
RSc1253
Putative polysaccharide deacetylase; signal peptide protein.
 
    0.808
RSc1254
Putative sterol desaturase transmembrane protein.
 
     0.789
RSc1252
Putative nitrous oxide reductase, n-terminal; signal peptide protein.
 
     0.768
RSc2765
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.695
gspJ
Probable general secretory pathway j transmembrane protein.
  
     0.691
RSc1397
Probable transmembrane protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
 
     0.678
RSc0562
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.629
phaP1
Probable polyhydroxybutyrate granule-associated protein (phasin) phap1.
  
     0.617
RSc2234
Probable transmembrane protein.
  
     0.612
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.