STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ugpEProbable sn-glycerol-3-phosphate transmembrane abc transporter protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (282 aa)    
Predicted Functional Partners:
ugpA
Probable sn-glycerol-3-phosphate transmembrane abc transporter protein.
 0.999
upgC
Probable sn-glycerol-3-phosphate transport atp-binding abc transporter protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 0.998
ugpB
Probable glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide.
 
 0.997
RSc2140
Probable sugar atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
 0.956
RSc2143
Probable transmembrane abc transporter protein.
 
 0.929
ugpQ
Probable glycerophosphoryl diester phosphodiesterase protein.
 
  
 0.860
RSc3048
Probable sugar abc transporter, permease abc transporter protein.
 
 
 0.835
RSc3046
Putative sugar-phosphate atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
 0.801
RSc3047
Probable atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
 
 0.800
RSc2144
Probable sugar-binding periplasmic signal peptide protein.
  
 
 0.741
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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