STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc1282Probable transmembrane protein. (84 aa)    
Predicted Functional Partners:
RSc1280
Probable iron-sulfur 4fe-4s ferredoxin transmembrane protein.
  
  
 0.921
RSc1281
Probable lipoprotein transmembrane.
  
  
 0.912
RSc1278
Probable cog4736, cbb3-type cytochrome oxidase, subunit 3 oxidoreductase protein.
  
    0.740
RSc1279
Probable cytochrome c oxidase (subunit III) transmembrane protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
    0.714
RSc1277
Probable cytochrome c oxidase (subunit II) transmembrane protein.
       0.640
RSc1276
Probable cytochrome c oxidase (subunitI transmembrane protein; Belongs to the heme-copper respiratory oxidase family.
     
 0.638
RSc1275
Probable signal peptide protein.
     
 0.509
RSc1274
Probable cation-transporting atpase lipoprotein transmembrane.
     
 0.471
RSc2955
Putative abc-type multidrug transport system, permease component abc transporter protein.
   
    0.433
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.