STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrBProbable multidrug resistance b (translocase) transmembrane protein; Belongs to the major facilitator superfamily. (518 aa)    
Predicted Functional Partners:
emrA
Probable multidrug resistance a (translocase) transmembrane protein.
 
 
 0.993
RSc2726
Probable multidrug resistance transport transmembrane protein.
 
 0.846
RSp0440
Putative multidrug resistance homolog transmembrane protein.
 
 0.845
RSc1853
Probable multidrug resistance transmembrane protein.
 
 
 0.843
RSc1294
Putative outer membrane chanel lipoprotein.
 
   0.803
acrR
Putative acrab operon repressor transcription regulator protein.
      
 0.630
RSc1295
Probable transcription regulator protein.
 
     0.602
RSc1727
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
      
 0.542
RSc1854
Putative outer membrane multidrug resistance lipoprotein.
 
   0.429
yajC
Probable preprotein translocase subunit yajc transmembrane; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
    
 
 0.423
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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