STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1298Probable enoyl(3-hydroxyisobutyryl)-coenzyme a hydratase protein. (376 aa)    
Predicted Functional Partners:
mmsB
Probable 3-hydroxyisobutyrate dehydrogenase oxidoreductase protein; Belongs to the HIBADH-related family.
  
 0.943
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.741
paaH1
Probable 3-hydroxybutyryl-coa dehydrogenase oxidoreductase protein.
 
 0.714
RSc1806
Probable polyketide synthase protein.
  
 0.698
RSp0671
Putative enoyl coa-hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
     0.677
RSc3079
Probable composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
   
 
 0.673
RSp1676
Probable composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
   
 
 0.673
RSp1178
Probable composite two-component transcriptional regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
   
 
 0.665
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
   
 
 0.665
dusA
Putative trna-dihydrouridine synthase protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.
       0.634
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.