Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RSc1318 | RSc1323 | RSc1318 | RSc1323 | Putative polysaccharide deacetylase; protein. | Putative transmembrane protein. | 0.973 |
RSc1318 | RSp1193 | RSc1318 | RSp1193 | Putative polysaccharide deacetylase; protein. | Probable glycosyltransferases of pmt family transmembrane protein. | 0.931 |
RSc1318 | pmrF | RSc1318 | RSc1321 | Putative polysaccharide deacetylase; protein. | Probable lipid a biosynthesis (glycosyltransferase) transmembrane protein. | 0.963 |
RSc1318 | pmrH | RSc1318 | RSc1322 | Putative polysaccharide deacetylase; protein. | Probable udp-l-4-amino-4-deoxy-l-arabinose synthase (aminotransferase) protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.926 |
RSc1318 | pmrIa | RSc1318 | RSc1320 | Putative polysaccharide deacetylase; protein. | Methionyl-tRNA formyltransferase; Probable uridine 5''-diphospho--(4-deoxy-4-formamido-l-arabinose) synthase (formyltransferase) oxidoreductase protein. | 0.946 |
RSc1318 | pmrIb | RSc1318 | RSc1319 | Putative polysaccharide deacetylase; protein. | Probable uridine 4''-ketopentose synthase oxidoreductase protein. | 0.942 |
RSc1318 | pmrK | RSc1318 | RSc1324 | Putative polysaccharide deacetylase; protein. | Probable lipid a biosynthesis transmembrane protein. | 0.959 |
RSc1323 | RSc1318 | RSc1323 | RSc1318 | Putative transmembrane protein. | Putative polysaccharide deacetylase; protein. | 0.973 |
RSc1323 | RSp1193 | RSc1323 | RSp1193 | Putative transmembrane protein. | Probable glycosyltransferases of pmt family transmembrane protein. | 0.845 |
RSc1323 | pmrF | RSc1323 | RSc1321 | Putative transmembrane protein. | Probable lipid a biosynthesis (glycosyltransferase) transmembrane protein. | 0.931 |
RSc1323 | pmrH | RSc1323 | RSc1322 | Putative transmembrane protein. | Probable udp-l-4-amino-4-deoxy-l-arabinose synthase (aminotransferase) protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.911 |
RSc1323 | pmrIa | RSc1323 | RSc1320 | Putative transmembrane protein. | Methionyl-tRNA formyltransferase; Probable uridine 5''-diphospho--(4-deoxy-4-formamido-l-arabinose) synthase (formyltransferase) oxidoreductase protein. | 0.903 |
RSc1323 | pmrIb | RSc1323 | RSc1319 | Putative transmembrane protein. | Probable uridine 4''-ketopentose synthase oxidoreductase protein. | 0.927 |
RSc1323 | pmrK | RSc1323 | RSc1324 | Putative transmembrane protein. | Probable lipid a biosynthesis transmembrane protein. | 0.931 |
RSp1006 | pmrF | RSp1006 | RSc1321 | Putative eps aminotransferase protein; Belongs to the DegT/DnrJ/EryC1 family. | Probable lipid a biosynthesis (glycosyltransferase) transmembrane protein. | 0.547 |
RSp1006 | pmrIa | RSp1006 | RSc1320 | Putative eps aminotransferase protein; Belongs to the DegT/DnrJ/EryC1 family. | Methionyl-tRNA formyltransferase; Probable uridine 5''-diphospho--(4-deoxy-4-formamido-l-arabinose) synthase (formyltransferase) oxidoreductase protein. | 0.497 |
RSp1006 | pmrIb | RSp1006 | RSc1319 | Putative eps aminotransferase protein; Belongs to the DegT/DnrJ/EryC1 family. | Probable uridine 4''-ketopentose synthase oxidoreductase protein. | 0.450 |
RSp1193 | RSc1318 | RSp1193 | RSc1318 | Probable glycosyltransferases of pmt family transmembrane protein. | Putative polysaccharide deacetylase; protein. | 0.931 |
RSp1193 | RSc1323 | RSp1193 | RSc1323 | Probable glycosyltransferases of pmt family transmembrane protein. | Putative transmembrane protein. | 0.845 |
RSp1193 | pmrF | RSp1193 | RSc1321 | Probable glycosyltransferases of pmt family transmembrane protein. | Probable lipid a biosynthesis (glycosyltransferase) transmembrane protein. | 0.900 |
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