STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc1351Putative transmembrane sensor histidine kinase transcription regulator protein. (414 aa)    
Predicted Functional Partners:
RSc1352
Probable two-component response regulator transcription regulator protein.
  
 0.985
RSp1178
Probable composite two-component transcriptional regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
 
    
 0.894
RSc1350
Probable transmembrane protein.
       0.774
vsrB
Composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
 
    
 0.683
rbn
Putative ribonuclease bn transmembrane protein.
      
 0.634
RSp1664
Putative ribonuclease rnase bn (rbn) transmembrane protein.
      
 0.634
mocB
Putative rhizopine-binding precursor signal peptide protein.
 
 
 0.600
RSc1791
Probable solute-binding periplasmic (pbp) abc transporter protein.
   
   0.597
RSc2934
Probable bacterial extracellular solute-binding, family 1; abc transporter protein.
   
   0.597
RSc2937
Putative periplasmic iron-binding signal peptide protein.
   
   0.597
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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