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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1352Probable two-component response regulator transcription regulator protein. (270 aa)    
Predicted Functional Partners:
RSc1351
Putative transmembrane sensor histidine kinase transcription regulator protein.
  
 0.986
RSc1350
Probable transmembrane protein.
     
 0.782
ilvG
Putative acetolactate synthase isozyme II (large subunit) protein; Belongs to the TPP enzyme family.
     
 0.562
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.543
rraA
Probable regulator of ribonuclease activity a protein; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions (By similarity).
       0.488
RSc1355
Hypothetical protein of unknown function upf0131.
       0.488
pilG
Probable twitching motility two-component response regulator transcription regulator protein.
  
   
 0.467
pilI
Putative twitching motility protein.
  
   
 0.447
RSc1349
Putative type III effector protein.
       0.445
pilH
Putative twitching motility two-component response regulator transcription regulator protein.
  
   
 0.419
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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