STRINGSTRING
RSc1362 protein (Ralstonia solanacearum GMI1000) - STRING interaction network
"RSc1362" - Protein in Ralstonia solanacearum GMI1000
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1362Protein (233 aa)    
Predicted Functional Partners:
RSc2350
Aldehyde dehydrogenase (478 aa)
   
 
    0.911
RSc0161
Transmembrane aldehyde dehydrogenase oxidoreductase (503 aa)
   
 
    0.911
dehH
Haloacetate dehalogenase H-1 protein (308 aa)
   
 
  0.811
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (370 aa)
   
 
    0.797
guaB
Inosine 5’-monophosphate dehydrogenase (487 aa)
       
  0.785
RSc0413
Hypothetical protein (333 aa)
       
    0.733
aceB
Malate synthase (529 aa)
         
  0.648
RSc1361
Hypothetical protein (73 aa)
              0.538
RSc2431
Hypothetical protein (599 aa)
   
 
    0.516
secY
Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (448 aa)
       
      0.516
Your Current Organism:
Ralstonia solanacearum GMI1000
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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