STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1381Probable transmembrane abc transporter protein. (307 aa)    
Predicted Functional Partners:
RSc1382
Probable transmembrane abc transporter protein.
 
 0.999
RSc1380
Probable substate-binding periplasmic (pbp) abc transporter protein.
 0.997
RSc1379
Probable atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
 0.991
RSc1384
Putative peptidase m55 related protein.
  
 0.940
dppC2
Probable dipeptide transmembrane abc transporter protein.
  
 0.936
RSc2006
Probable extracellular solute-binding, family 5 abc transporter protein.
 
 0.926
dppC1
Probable dipeptide transport system permease transmembrane protein.
  
 0.918
dppD2
Probable oligopeptide atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
 0.907
dppD1
Probable oligopeptide atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
 0.906
RSc1383
Probable peptidase protein.
 
    0.904
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.