STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1448Putative pep phosphonomutase or related enzyme protein. (279 aa)    
Predicted Functional Partners:
prpD
Probable prpd protein.
 
  
 0.760
gltA
Probable citrate synthase protein; Belongs to the citrate synthase family.
  
 
 0.715
prpC
Probable methylcitrate synthase (citrate synthase 2) protein; Belongs to the citrate synthase family.
  
 
 0.715
prpB2
Putative carboxyvinyl-carboxyphosphonate phosphorylmutase protein; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
  
     0.598
prpB1
Probable carboxyvinyl-carboxyphosphonate phosphorylmutase protein; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
  
     0.578
RSp0119
Hypothetical of unknown function duf453; transmembrane protein.
 
  
 0.543
RSc1447
Putative transcription regulator protein.
       0.538
RSc1445
Putative efflux permease transmembrane protein.
       0.535
hipA
Putative hipa transcription regulator protein.
       0.535
RSc1732
Putative binding-protein-dependent transport systems inner membrane component abc transporter.
  
    0.500
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.