STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1457Probable protein of unknown function duf1289. (91 aa)    
Predicted Functional Partners:
RSc1458
Putative glucoamylase or related glycosyl hydrolase protein.
       0.671
RSc2385
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.593
phaP1
Probable polyhydroxybutyrate granule-associated protein (phasin) phap1.
  
     0.591
phaP2
Probable polyhydroxybutyrate granule-associated protein (phasin) phap2.
  
     0.532
RSc1459
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.497
ssuF
Putative molybdopterin-binding protein.
  
     0.480
RSc2555
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.428
RSc2404
Hypothetical signal peptide protein.
 
     0.425
RSc2986
Probable cytochrome c biogenesis transmembrane protein.
  
     0.406
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.