STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1463Hypothetical protein of unknown function duf182. (343 aa)    
Predicted Functional Partners:
RSc1469
Probable oxidoreductase oxidoreductase protein.
 
  
 0.905
RSc1467
Probable dehydrogenase, oxidoreductase protein.
 
  
 0.883
RSp0327
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
  
 0.879
RSc1468
Putative oxidoreductase molybdopterin-binding subunit, oxidoreductase protein.
 
  
 0.804
RSc0626
Probable aldehyde dehydrogenase (subunit III) oxidoreductase protein.
 
  
 0.803
RSp0324
Probable dehydrogenase, small chain oxidoreductase protein.
 
  
 0.802
iorA2
Probable isoquinoline 1-oxidoreductase (alpha subunit) oxidoreductase protein.
 
  
 0.801
iorB2
Probable transmembrane isoquinoline 1-oxidoreductase (beta subunit) oxidoreductase protein.
 
  
 0.763
RSc0627
Putative dehydrogenase large chain transmembrane protein.
 
  
 0.715
RSp0325
Probable dehydrogenase, large chain oxidoreductase protein.
 
  
 0.701
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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