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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1467Probable dehydrogenase, oxidoreductase protein. (268 aa)    
Predicted Functional Partners:
RSc1468
Putative oxidoreductase molybdopterin-binding subunit, oxidoreductase protein.
 
 
 0.990
RSc1469
Probable oxidoreductase oxidoreductase protein.
 
 0.990
RSc1464
Probable transmembrane protein.
 
  
 0.961
RSc1465
Probable von willebrand domain harboring protein.
 
     0.954
RSc1466
Putative atpase protein.
 
   
 0.951
RSc1463
Hypothetical protein of unknown function duf182.
 
  
 0.883
iorA2
Probable isoquinoline 1-oxidoreductase (alpha subunit) oxidoreductase protein.
 
 0.860
RSc0626
Probable aldehyde dehydrogenase (subunit III) oxidoreductase protein.
 
 0.837
RSp0324
Probable dehydrogenase, small chain oxidoreductase protein.
 
 0.833
RSc0627
Putative dehydrogenase large chain transmembrane protein.
  
 
 0.766
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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