STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1491Probable phage-related protein. (768 aa)    
Predicted Functional Partners:
RSc1490
Probable transmembrane protein.
       0.553
RSc1916
Probable phage-related protein.
  
    0.445
RSc1913
Probable phage-related tail protein.
  
    0.422
RSc1935
Probable bacteriophage protein.
  
    0.422
RSc1936
Probable bacteriophage protein.
  
    0.422
RSc1937
Probable bacteriophage protein.
  
    0.422
RSc1938
Probable bacteriophage protein.
  
    0.422
RSc1940
Probable terminase (atpase subunit) related protein.
  
    0.421
RSc1941
Probable bacteriophage protein.
  
    0.421
RSc1928
Probable tail completion-like protein.
  
    0.417
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.