STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1504Probable universal stress protein (usp). (151 aa)    
Predicted Functional Partners:
RSp1159
Probable universal stress protein related nucleotide-binding protein.
  
     0.728
engB
Probable gtpase protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
    
 
 0.603
RSc1505
Putative alcohol dehydrogenase superfamily, zinc-containing oxidoreductase protein.
  
    0.568
pcaB
Probable 3-carboxy-cis,cis-muconate cycloisomerase protein.
  
   
 0.541
gcvH
Probable glycine cleavage system h protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
   
  
 0.490
RSc0807
Putative tautomerase (4-oxalocrotonate tautomerase) protein.
   
  
 0.474
RSp1151
Putative 4-oxalocrotonate tautomerase homolog protein.
   
  
 0.474
RSp1645
Putative 4-oxalocrotonate tautomerase protein.
   
  
 0.474
prpE
Propionyl-coenzyme a synthetase prpe protein.
      
 0.471
dsbC
Probable thiol:disulfide interchange protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
      
 0.439
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.