STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RSc1505Putative alcohol dehydrogenase superfamily, zinc-containing oxidoreductase protein. (334 aa)    
Predicted Functional Partners:
RSc2350
Probable aldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
  
 0.920
betB
Putative betaine aldehyde dehydrogenase (badh) oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
  
 0.912
exaC
Putative nad+ dependent acetaldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
  
 0.912
dmpF
Probable acetaldehyde dehydrogenase oxidoreductase protein; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
     
 0.904
nagAb
Probable ferredoxin subunit of a ring-hydroxylating dioxygenase oxidoreductase protein.
     
  0.900
nagAa
Probable ferredoxin oxidoreductase oxidoreductase protein.
    
  0.900
RSc1506
Probable transmembrane protein.
       0.605
RSc1504
Probable universal stress protein (usp).
  
    0.568
maeB1
Putative nadp-dependent malic enzyme oxidoreductase protein.
  
  
 0.438
maeB2
Putative nadp-dependent malic enzyme oxidoreductase protein.
  
  
 0.438
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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