STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1544Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (286 aa)    
Predicted Functional Partners:
RSc1542
Putative uncharacterized nad(fad)-dependent dehydrogenase transmembrane protein.
 
 0.816
RSc1543
Probable transcription regulator protein.
 
   
 0.711
RSc0438
Probable signal peptide protein.
 
     0.621
RSc0437
Probable signal peptide protein.
 
     0.584
RSc1541
Probable transmembrane protein.
 
   
 0.542
RSp0641
Probable non ribosomal peptide synthetase protein.
   
 
 0.526
gstI
Probable glutathione-s-transferase protein; Belongs to the GST superfamily.
  
   0.457
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.