STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc1545Probable signal transduction eal-ggdef domains transmembrane protein. (776 aa)    
Predicted Functional Partners:
RSp0254
Probable signal transduction eal-ggdef domains transmembrane protein.
 
 
0.770
RSp0281
Putative signal transduction protein ggdef domain.
 
 
 0.683
RSc0510
Probable signal transduction eal-ggdef domains transmembrane protein.
 
 
0.604
RSp0012
Probable signal transduction ggdef domain transmembrane protein.
 
 
0.591
RSp1208
Probable signal transduction protein eal-ggdef domains.
 
 
0.567
RSp1097
Probable signal transduction eal-ggdef domains transmembrane protein.
 
 
0.542
RSc0375
Probable signal transduction ggdef domain transmembrane protein.
 
 
0.531
RSp1203
Probable signal transduction protein ggdef domain.
 
 
0.528
RSp0813
Putative signal transduction eal-ggdef domains transmembrane protein.
 
 
0.527
RSc0592
Putative metal-dependent phosphohydrolase harboring a hd domain protein.
 
  
 0.526
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.