STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1553Putative transglycolsylase protein. (1589 aa)    
Predicted Functional Partners:
RSc1552
Hypothetical protein; Miscellaneous; unknown.
       0.535
RSc2291
Putative transglycosylase signal peptide protein.
  
     0.501
RSc0977
Putative transglycosylase signal peptide protein.
  
     0.465
fliE
Probable flagellar hook-basal body complex protein flie.
  
  
 0.457
fliD
Probable flagellar hook-associated protein 2 (filament cap protein); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.452
fliI
Probable flagellum-specific atp synthase protein.
  
  
 0.424
hrcN
Hrp conserved protein hrcn.
  
  
 0.424
fliM
Probable flagellar motor switch protein flim.
  
    0.423
flgE
Probable flagellar hook protein flge.
  
  
 0.422
fliF
Probable flagellar m-ring transmembrane protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
    0.401
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.