STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc1557Probable transmembrane protein. (129 aa)    
Predicted Functional Partners:
RSc1556
Probable oxidoreductase protein.
 
     0.850
wrbA
Probable trp repressor binding protein; Belongs to the WrbA family.
       0.788
phaP2
Probable polyhydroxybutyrate granule-associated protein (phasin) phap2.
  
     0.754
phaP1
Probable polyhydroxybutyrate granule-associated protein (phasin) phap1.
  
     0.754
RSc3084
Probable transmembrane protein.
  
     0.727
RSc0305
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.725
RSc2555
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.723
rbn
Putative ribonuclease bn transmembrane protein.
  
    0.709
RSc1598
Probable two-component transmembrane sensor histidine kinase transcription regulator protein.
  
     0.705
RSc2081
Probable transmembrane protein.
  
     0.683
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.