STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc1561Probable hydrolase protein. (274 aa)    
Predicted Functional Partners:
metY
Probable o-acetylhomoserine (thiol)-lyase (methionine/homocysteine synthase) protein.
 
     0.815
RSc1560
Putative transmembrane protein.
       0.776
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.671
hemH
Probable ferrochelatase (protoheme ferro-lyase) (hemesynthetase) protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
      0.577
RSc2020
Probable acyl-coa dehydrogenase oxidoreductase protein.
  
  0.503
RSc1563
Probable cystathionine-beta-synthase domain harboring protein.
       0.497
RSc1806
Probable polyketide synthase protein.
  
 0.463
RSc1564
Putative phospholipid/glycerol acyltransferase transmembrane protein.
 
   0.462
RSc1759
3-hydroxyacyl-CoA dehydrogenase; Probable trifunctonal: enoyl-coa hydratase and delta3-cis-delta2-trans-enoyl-coa isomerase and 3-hydroxyacyl-coa dehydrogenase oxidoreductase protein.
  
 
 0.461
livJ
Probable leu/ile/val-binding precursor signal peptide protein.
  
     0.456
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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